A complete pipeline enables haplotyping and phasing macrohaplotype in long sequencing reads for polyploidy samples and a multi-source DNA mixture
NCJ Number
308426
Journal
Date Published
January 2024
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Evaluation and Implementation of High Throughput Second Generation Sequencing for Mitochondrial DNA Testing in Missing Persons and Forensic Casework at the UNT Center for Human Identification
NCJ Number
307117
Date Published
June 2023
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical),
Program/Project Evaluation
Publication Link
MPKin-YSTR: Interpretation of Y chromosome STR haplotypes for missing persons cases
NCJ Number
306621
Journal
Date Published
April 2023
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
TRcaller: A Novel Tool for Precise and Ultrafast Tandem Repeat Variant Genotyping in Massively Parallel Sequencing Reads
NCJ Number
308049
Journal
Date Published
2023
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Assessing sequence variation and genetic diversity of currently untapped Y-STR loci
NCJ Number
305729
Journal
Date Published
December 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
USAT: a bioinformatic toolkit to facilitate interpretation and comparative visualization of tandem repeat sequences
NCJ Number
305709
Journal
Date Published
November 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Optimized variant calling for estimating kinship
NCJ Number
305597
Date Published
November 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
A machine learning approach for missing persons cases with high genotyping errors
NCJ Number
305511
Journal
Date Published
October 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Re: Riman et al. Examining performance and likelihood ratios for two likelihood ratio systems using the PROVEDIt dataset
NCJ Number
307013
Date Published
July 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
ProSynAR: a reference aware read merger
NCJ Number
304567
Journal
Date Published
April 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Skater: An R Package for SNP-based Kinship Analysis, Testing, and Evaluation
NCJ Number
307014
Journal
Date Published
January 2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Evaluating probabilistic genotyping for low-pass DNA sequencing
NCJ Number
307472
Date Published
2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
vcferr: Development, validation, and application of a single nucleotide polymorphism genotyping error simulation framework
NCJ Number
307488
Journal
Date Published
2022
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
MMDIT: A tool for the deconvolution and interpretation of mitochondrial DNA mixtures
NCJ Number
303542
Date Published
November 2021
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Population Informative Markers Selected Using Wright's Fixation Index and Machine Learning Improves Human Identification Using the Skin Microbiome
NCJ Number
303171
Date Published
September 2021
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
ProDerAl: reference position dependent alignment
NCJ Number
302958
Journal
Date Published
August 2021
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Evaluation of Promega PowerSeq™ Auto/Y systems prototype on an admixed sample of Rio de Janeiro, Brazil: Population data, sensitivity, stutter and mixture studies
NCJ Number
302824
Date Published
July 2021
Agencies
NIJ-Sponsored
Publication Type
Program/Project Evaluation,
Research (Applied/Empirical)
Publication Link
Reverse Complement-PCR, An Innovative and Effective Method for Multiplexing Forensically Relevant Single Nucleotide Polymorphism Marker Systems
NCJ Number
302015
Journal
Date Published
2021
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Reducing noise and stutter in short tandem repeat loci with unique molecular identifiers
NCJ Number
305065
Date Published
2021
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
STRait Razor Online: An enhanced user interface to facilitate interpretation of MPS data
NCJ Number
304502
Date Published
2021
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Evaluation of Promega PowerSeq (TM) Auto/Y systems prototype on an admixed sample of Rio de Janeiro, Brazil: Population data, sensitivity, stutter and mixture studies
NCJ Number
304686
Date Published
2021
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Numt identification and removal with RtN!
NCJ Number
302398
Journal
Date Published
October 2020
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Are low LRs reliable?
NCJ Number
304025
Date Published
2020
Agencies
NIJ-Sponsored
Publication Type
Research (Applied/Empirical)
Publication Link
Date Created: September 3, 2020